Short RNAseq results for metabolic pathways

netpumber · 01-26-2015, 02:22 PM

Hello.

I would like to create some graphical representation of mouse RNA-seq data that have been assembled and DE has been calculated, that will show on which metabolic paths, our genes are involved.

Is there any database/tool specific and open source for mouse data for such a usage?

Thank you very much.

GenoMax · 01-26-2015, 03:39 PM

http://genemania.org/

Perhaps: http://www.reactome.org/

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01-26-2015, 02:22 PM	#1
netpumber Member Location: GER Join Date: May 2014 Posts: 21	Short RNAseq results for metabolic pathways Hello. I would like to create some graphical representation of mouse RNA-seq data that have been assembled and DE has been calculated, that will show on which metabolic paths, our genes are involved. Is there any database/tool specific and open source for mouse data for such a usage? Thank you very much.

01-26-2015, 03:39 PM	#2
GenoMax Senior Member Location: East Coast USA Join Date: Feb 2008 Posts: 7,089	http://genemania.org/ Perhaps: http://www.reactome.org/