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Old 02-25-2011, 03:37 PM   #1
Location: Seattle, WA

Join Date: Sep 2010
Posts: 17
Default Does Cuffdiff normalize FPKMS before it does differential expression?

Does Cuffdiff normalize FPKMs before it runs differential expression? If so what kind of normalization is performed? Can't find it in the documentation. Any ideas folks have are appreciated. Thanks -Rich
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