I have topHat-mapped reads that I converted to bed format so that I can pass it to DEGseq.
How can I make sure the reads are uniquely mapped, as requested by DEGseq? Should I re-run Bowtie or DEGseq takes care of that?
Thanks!
How can I make sure the reads are uniquely mapped, as requested by DEGseq? Should I re-run Bowtie or DEGseq takes care of that?
Thanks!
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