Hello,
We are performing full length plasmid sequencing using Ion Torrent's GeneStudio S5 prime system and are not detecting large INDELs (~150bp) using Torrent Suite software. We have heard that BBTools work great for detecting INDELs with Illumina platform.
Has anyone used BBTools to analyze fastq files generated from Ion Torrent system? Any suggestions will be appreciated!
We are performing full length plasmid sequencing using Ion Torrent's GeneStudio S5 prime system and are not detecting large INDELs (~150bp) using Torrent Suite software. We have heard that BBTools work great for detecting INDELs with Illumina platform.
Has anyone used BBTools to analyze fastq files generated from Ion Torrent system? Any suggestions will be appreciated!
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