Dear all,
we are implementing a simple mapping/indel-calling pipeline, and in order to test, if everything is in place, I am searching for a handy, manageable dataset as an example or excerpt of a SOLID paired-end genomic DNA sequencing experiment. In detail, I am referring to .csfasta and .qual files of the reads, and optionally a reference (although this should be relatively easy to obtain elsewhere). No matter from which organism, though. I was wondering whether you know of such a data set, maybe as a part of a mapping tool package?
Any idea will be very much appreciated.
cheers,
Sophia
PS.: I found some data sets on the AB website, but unfortunately no genomic paired-end reads.
we are implementing a simple mapping/indel-calling pipeline, and in order to test, if everything is in place, I am searching for a handy, manageable dataset as an example or excerpt of a SOLID paired-end genomic DNA sequencing experiment. In detail, I am referring to .csfasta and .qual files of the reads, and optionally a reference (although this should be relatively easy to obtain elsewhere). No matter from which organism, though. I was wondering whether you know of such a data set, maybe as a part of a mapping tool package?
Any idea will be very much appreciated.
cheers,
Sophia
PS.: I found some data sets on the AB website, but unfortunately no genomic paired-end reads.
Comment