hi gus,
Has anyone here compared one run data between solexa and 454?
It seems that one run of solexa can gernerate about 50000000 reads, 35 bp average, while a complete run of 454 (GS FLX ) can have about 400000 reads with average 250 bp.
One gets longer, while the other gets more.
I am confused now, i don't know which one is better for de novo assemble (there's no reference sequence)?
does anyone have the experience?
Has anyone here compared one run data between solexa and 454?
It seems that one run of solexa can gernerate about 50000000 reads, 35 bp average, while a complete run of 454 (GS FLX ) can have about 400000 reads with average 250 bp.
One gets longer, while the other gets more.
I am confused now, i don't know which one is better for de novo assemble (there's no reference sequence)?
does anyone have the experience?
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