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Old 06-19-2015, 10:12 AM   #1
cmccabe
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Location: chicago

Join Date: Jul 2012
Posts: 353
Default coverage per bait calculation

In order to calculate coverage per bait is the calculation: bait reads / (bait length * 100)? That seems a bit off when I put real #'s to it (158 / (153*100) = 0.01. Thank you .


EDIT:

( read count * read length ) / length of area in question

so if the average reads for a bait were 158 at a read length of 150 and the bait length was 153

(158 * 150) / 153 = 155x
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