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Old 10-29-2010, 09:12 AM   #1
sari_khaleel
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Location: Newark, DE, USA

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Question Velvet insert length on Illumina NGS Paired end reads

Hello,
I am new to Velvet and I am trying to run it on my llumina NGS Paired end reads (I know that I have to shuffle them).
The only Velvetg parameter that I am not sure about is insert length. Is it equivalent to read length (minus adapter sequence length, if found)?

Thanks,
Sari
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