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04-01-2011, 01:03 PM
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#1 |
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Member
Location: los angeles, ca Join Date: Aug 2010
Posts: 11
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unaligned reads of tophat
Does anyone know a way to see which reads from tophat are unaligned? I figured out how to do this in bowtie with the --un and --max options, but does someone have a way to do this in tophat?
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04-07-2011, 11:06 AM
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#2 | |
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Senior Member
Location: Rochester, MN Join Date: Mar 2009
Posts: 191
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