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Thread | Thread Starter | Forum | Replies | Last Post |
Allele frequency calculation in SNP calling | Rachelly | Bioinformatics | 5 | 05-14-2012 12:07 PM |
how to fetch the snp allele frequency? | dzmtnvmt | Bioinformatics | 3 | 06-21-2011 04:44 AM |
tools for SNP calling in pooled samples | gfmgfm | Bioinformatics | 0 | 12-30-2010 10:57 AM |
SNP calling software in pooled samples | mrxcm3 | Bioinformatics | 3 | 11-03-2010 10:38 PM |
PubMed: SNP frequency estimation using massively parallel sequencing of pooled DNA. | Newsbot! | Literature Watch | 0 | 10-16-2008 06:00 AM |
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#1 |
Senior Member
Location: Canada Join Date: Jun 2008
Posts: 103
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When sequencing pooled population DNA Samples, how the relative amounts of each allele in a sample change?
After mapping the short reads, we caculate the SNP frequency(minor,major), can we use this frequency to estimate the frequency in the original sample? |
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#2 |
Senior Member
Location: Canada Join Date: Jun 2008
Posts: 103
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anybody here give me suggestions?
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