I try to run : sff_extract -o EG -l linker.fasta -i "insert_size:3000,insert_stdev:900" 454_flx_reads.sff
And I got this:
Working on '454_flx_reads.sff:
Creating temporary sequences from reads in '454_flx_reads.sff' ... done.
Searching linker sequences with SSAHA2 (this may take a while) ...
An error occured during the SSAHA2 execution, aborting.
Can I know what is the problem causing it happend?
My ssaha2 version is 2.4.1
My sff_extract version is 0.2.6
Thanks a lot for all of your guide and suggestion.
And I got this:
Working on '454_flx_reads.sff:
Creating temporary sequences from reads in '454_flx_reads.sff' ... done.
Searching linker sequences with SSAHA2 (this may take a while) ...
An error occured during the SSAHA2 execution, aborting.
Can I know what is the problem causing it happend?
My ssaha2 version is 2.4.1
My sff_extract version is 0.2.6
Thanks a lot for all of your guide and suggestion.
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