SEQanswers

Go Back   SEQanswers > Sequencing Technologies/Companies > Ion Torrent



Similar Threads
Thread Thread Starter Forum Replies Last Post
Denovo assembly combine Ilumina PE reads and sanger reads bobo xin De novo discovery 4 11-01-2013 07:35 AM
duplicate reads in Illumina short, single end reads of RNAseq data inbarpl Bioinformatics 4 05-22-2012 09:36 AM
Assembling Sanger Reads santhosh003 Bioinformatics 3 04-22-2010 12:54 AM
sanger and solexa reads assemby peio Bioinformatics 4 09-09-2009 03:06 AM
Best tool to map 454 reads onto sanger reads? dan Bioinformatics 3 07-27-2009 09:51 AM

Reply
 
Thread Tools
Old 10-30-2015, 07:55 AM   #1
paraslonic
Junior Member
 
Location: Moscow

Join Date: Apr 2012
Posts: 7
Lightbulb Dataset with Ion reads and Illumina/Sanger reads is needed

Hi!
I`ve developed a small tool which corrects indel errors in reads. It results in much lower number of genes with artificial stop codon or frameshift in the assembly.
To verify my program and make it public I highly need a read sets with Ion Torrent reads (which are prone to indel errors) and some reads which are accurate at this (i.e. Illumina).

Please share if you have such dataset or maybe you know where can I find one
paraslonic is offline   Reply With Quote
Reply

Tags
dataset, error correction, frameshift correction, indel correctio

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 02:48 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO