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Old 07-22-2019, 01:32 AM   #1
areensh
Junior Member
 
Location: haifa

Join Date: Jul 2019
Posts: 1
Default Error on make when installing bcl2fatq 2.20

i am trying to install bcl2fatq following the commands:

1. wget ftp://webdata2:webdata2@ussd-ftp.ill...2-20-0-tar.zip
2. unzip bcl2fastq2-v2-20-0-tar.zip
3. tar -zxvf bcl2fastq2-v2.20.0.422-Source.tar.gz
4. export INSTALL_DIR=~/local
5. cd bcl2fastq
6. ./src/configure --prefix=~/local
7. make
8. make install

i keep getting an error on the make step (please see the attached image of my terminal) can someone please tell me how can fix this ??
i am using arch linux, gcc 8.2.1 , i got all the libraries requierd for installation!
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File Type: png Screenshot from 2019-07-21 11-46-37 crop.png (134.3 KB, 7 views)
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Old 07-30-2019, 05:35 AM   #2
sklages
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Location: Berlin, DE

Join Date: May 2008
Posts: 625
Default

Maybe you find the solution here:
https://www.biostars.org/p/387127/
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