We're using a microarray platform from Agilent for a cancer study, and we're interested in analyzing data from SNP, gene expression copy number variations via Comparative Genomic Hybridization (CGH-arrays) perspectives, the analytical goals involve:
In our quest to acquire specialized software I have looked into GeneSpring and the Ingenuity Pathways analysis (IPA) in addition to Partek (Genomic Suite) but still I need assistance in recommending to me what other alternative vendors out there I should include in analyzing the requirements and the cross functionalities offered by each one of these solution for our analytical goals.
I am resorting to the wiser fellows at seqAnswers to guide me around by their generous contributions..
Thank You...
- Pathway Analysis
- Feature Extraction
- Miscellaneous analyses
In our quest to acquire specialized software I have looked into GeneSpring and the Ingenuity Pathways analysis (IPA) in addition to Partek (Genomic Suite) but still I need assistance in recommending to me what other alternative vendors out there I should include in analyzing the requirements and the cross functionalities offered by each one of these solution for our analytical goals.
I am resorting to the wiser fellows at seqAnswers to guide me around by their generous contributions..
Thank You...
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