I'm new to working with NGS and we have some illumina reads we'd like to convert to fastq.
I've read the posts and tried to run the script qseq2fastq.pl on the samples w/o success.
the files have the following format which doesn't look quite like qseq:
USI-EAS39:1:1:2:1362#0/1:CTGGNTTCCACAGGCACATAGCCAAACCGGTGCCT:32 32 29 24 4 28 33 32 32 34 32 34 32 30 33 33 32 33 33 33 33 32 33 29 30 33 33 33 28 21 26 30 30 33 30
Appreciate any conversions ideas.
Charles
I've read the posts and tried to run the script qseq2fastq.pl on the samples w/o success.
the files have the following format which doesn't look quite like qseq:
USI-EAS39:1:1:2:1362#0/1:CTGGNTTCCACAGGCACATAGCCAAACCGGTGCCT:32 32 29 24 4 28 33 32 32 34 32 34 32 30 33 33 32 33 33 33 33 32 33 29 30 33 33 33 28 21 26 30 30 33 30
Appreciate any conversions ideas.
Charles
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