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Old 06-06-2014, 12:30 PM   #1
milo0615
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Location: Walnut, California

Join Date: Dec 2012
Posts: 39
Default abyss-pe Read File Error:

Hello,

I am trying to run abyss-pe but I get the following error:

0: Reading `../../GerRegGA/GerRegina_1_trimmed.fastq'...
1: Reading `../../GerRegGA/GerRegina_2_trimmed.fastq'...
2: Reading `../../GerRegHS/GerRegina_HS_1_trimmed.fastq'...
3: Reading `../../GerRegHS/GerRegina_HS_2_trimmed.fastq'...
../../GerRegHS/GerRegina_HS_2_trimmed.fastq:5: error: Expected either `>' or `@' or 11 fields
and saw `
' and 0 fields near


Have anyone encounter this error before? Please advice.


Thank you,

-Milo
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