Hello everybody, please help me!!!!!!!!!!!!
I am using CisGenome in order to analyse ChIP-seq results.
Before analysing real results, I have to train myself with data given by the website :
http://www.biostat.jhsph.edu/~hji/ci...s/download.htm.
I can download :
- a genome database (human : hg18 on the website)
- a sample data (hg18)
Now I want use CisGenome,
(from Tutorial 2: ChIP-Seq Data Analysis, in the website)
First step:
I load the genome database
Second step:
I have to give an alignement (sequencing -> BAR files)
But I don't have any alignement actually, because it's just for training.
So how can I get this kind of data? Is it possible to create one using BLAST or do you know where can I download an alignment example.
I'am like a chicken in front of a knife... (french expression which means : I'm lost)
I am sorry if this question is ridiculous but I am a beginner in bioinformatics.
In fact, I'm a trainee and I have made only 5 months of studies.
Moreover, I apologize for my bad english. So if you understand nothing to my problem or if you need more information, I will try to explain clearlier.
Please, help the Beginner and you will up your karma!
I am using CisGenome in order to analyse ChIP-seq results.
Before analysing real results, I have to train myself with data given by the website :
http://www.biostat.jhsph.edu/~hji/ci...s/download.htm.
I can download :
- a genome database (human : hg18 on the website)
- a sample data (hg18)
Now I want use CisGenome,
(from Tutorial 2: ChIP-Seq Data Analysis, in the website)
First step:
I load the genome database
Second step:
I have to give an alignement (sequencing -> BAR files)
But I don't have any alignement actually, because it's just for training.
So how can I get this kind of data? Is it possible to create one using BLAST or do you know where can I download an alignment example.
I'am like a chicken in front of a knife... (french expression which means : I'm lost)
I am sorry if this question is ridiculous but I am a beginner in bioinformatics.
In fact, I'm a trainee and I have made only 5 months of studies.
Moreover, I apologize for my bad english. So if you understand nothing to my problem or if you need more information, I will try to explain clearlier.
Please, help the Beginner and you will up your karma!
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