Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
FastQC,kmer content, per base sequence content: is this good enough mgg Bioinformatics 10 11-06-2013 11:45 PM
AMOS: problem getting hawkeye to view bambus output Kennels Bioinformatics 3 08-24-2011 08:49 PM
Bambus coldturkey Bioinformatics 2 10-15-2009 06:51 AM
MIRA3: setup BAMBUS Configuration File problem facing edge Bioinformatics 0 10-01-2009 02:43 AM
Creates BAMBUS .mates file problem asking edge Bioinformatics 0 09-30-2009 02:13 AM

Thread Tools
Old 10-08-2009, 08:45 PM   #1
Senior Member
Location: China

Join Date: Sep 2009
Posts: 199
Default Bambus: *_bambus_scaffold stats content problem

Refer *_bambus_scaffold.stats content, I don't know how to calculate all the total scaffold size, minimun and maximum scaffold size,etc.
I not sure which file that should referred to get the content of *_bambus_scaffold.stats.
I try to calculate all the total scaffold size, minimun and maximum scaffold size,etc by using *_bambus_scaffold.fasta
Unfortunately, the result can't match with the contents of *_bambus_scaffold
Does anybody facing the same problem like me?
Thanks a lot for all of your advice.
edge is offline   Reply With Quote

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 09:10 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO