Hey everybody, I'm new here. Currently I've been teaching myself (biology student) how to use part, in particular for sequence alignments. Now I'm trying to write a script in perl where any sequence alignment algorithm outputs in a graphical way (alignment or visualise the path through scoring matrix). However, I've gotten as far as to making the Needleman-Wunsch scores but only in the command window, not a graphical way, but can't manage to put it in a graphical way or to get the arrows to signal the path. Let me know if you have any input.
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