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Old 10-31-2019, 04:12 PM   #1
tamu_anand
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Default Comparing bbduk with fastp for quality and adapter trimming

Hi

Has anyone compared results and performance of bbduk vs fastp when it comes to adapter and quality trimming of fastq read files?

I realize fastp will work without providing any adapter files.

I would appreciate any pointers on this and I am specifically looking for bbduk vs fastp.

Thanks in advance,
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