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Old 06-28-2011, 03:01 PM   #1
kidderb
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Default Equivalent of GNF Symatlas for rna-seq?

I'm wondering if there is a comprehensive database for RNA-Seq data from different mouse tissues similar to what Novartis GNF Symatlas generated? If so, any literature that describes such a database?

thanks
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Old 11-02-2012, 11:41 AM   #2
kidderb
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Default RNA-Seq database?

I still haven't been able to find a comprehensive database containing RNA-Seq data for the majority of tissues/cells in mice, similar to what GNF performed using a microarray platform. I found a paper below which contains a few samples, but it would be helpful to identify larger sets of data.

PMID: 22345621
"RNA-Seq Atlas--a reference database for gene expression profiling in normal tissue by next-generation sequencing"
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