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Old 07-04-2014, 12:57 AM   #1
sadiexiaoyu
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Location: Switzerland

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Default mapping contigs to reference genome

Dear All,

I got some contigs from de novo assemble. Now I would like to map these contigs to the reference genome. Is there any good software can do this?

Best,

Sadiexiaoyu
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Old 07-04-2014, 01:46 AM   #2
sphil
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check out mira , or maybe mauve
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Old 07-04-2014, 05:19 AM   #3
yzzhang
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abacas may be also usefulhttp://abacas.sourceforge.net/Manual.html
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