Hello I'm doing a benchmarking study on mapping quality for my thesis and I'm having problems with maq its mapping 25bp and 100bp reads but not 50bp or 75bp reads for some reason. I'm still trying to figure out what is going on but I've noticed something strange:
If I compile the latest build (0.7.1) myself I get an exe file that is 800kb, but if you do sudo apt-get install maq, the bin file is 240kb? I've been using the version that you can install from ubuntu but I thought they should be the same? Has anybody heard of issues between these versions?
If I compile the latest build (0.7.1) myself I get an exe file that is 800kb, but if you do sudo apt-get install maq, the bin file is 240kb? I've been using the version that you can install from ubuntu but I thought they should be the same? Has anybody heard of issues between these versions?
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