How to plot the QV distribution of SOLiD data ? Is there any tool available?
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Is anyone using FastQC on 5500 data? Apparently I need to convert the .csfasta/.qual files first to .fastq. There are several csfasta2fastq tools out there, but I can't get a single one to work on my data. My data is divided in 4 files, F3 csfasta/qual and F5_RNA csfasta/qual. Why, I don't know (yet). The versions of csfasta2qual I found don't like this very much. Or is there a different QV analysis tool I should be using?
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