SAMMate 2.4 release

xuguorong · 09-11-2010, 06:04 AM

Recently, we released SAMMate 2.4 on Sourceforge.net.
We added some new features and made many enhancements.
You can download it from the below link:
http://sammate.sourceforge.net

New features:
. Support BAM format;
. SAM/BAM format conversion;
. SAM/BAM file sorting;
. Users can now configure Output file names;

Enhancements:
. Changed a confusing icon;
. Changed the current path display;
. Changed the suffix of output file names;
. Added a help contents button on the menu;
. Added a progress bar;
. Added a file selection dialogue;
. Updated the manual;

atritt · 09-13-2010, 07:45 PM

This looks great. However, your software is only available for Mac and Windows users. Can you make the source available to us Linux users?

xuguorong · 09-14-2010, 09:14 AM

Thank you for using SAMMate!

We are planning to make the software available to Linux users, but the release date has not been decided yet. Once the Linux version is ready, I will let you know.

Balat · 09-17-2010, 01:59 AM

Hi xuguorong,
I installed SMMAte 2.4 on Windows xp machine when I tried to launch the program I get a message saying SAMMAte encountered a problem and needs to close. There may be a bug. Could please you look into it.

Bioinfo · 09-17-2010, 03:13 AM

Hi Balat,
I do have the same problem "SAMMate.exe has encountered a problem and needs to close. We are sorry for the inconvenience." did you fix it???
Thanks

xuguorong · 09-17-2010, 09:52 AM

Hi Balat and Bioinfo,

I am sorry for this bug on Win XP machine!
We met this kind of problem on Win XP machine before and it was caused by some .dll files missing on Win XP OS. But these .dll files are included in Win vista and 7 by default, so SAMMate does not have such problem on Win Vista and 7.

I will try to fix this problem soon and let you know.
Thank you for using SAMMate!

EarlyAdapter · 10-26-2010, 12:33 PM

Hello Xuguorong,

This programs looks very useful and we would love to have Linux version but in the meantime, could you point us to a location for the missing DLLs and where to install them while you work on a fix?

-Jack

xuguorong · 11-19-2010, 10:49 AM

Hi Jack,

I am sorry for late response!

We have released SAMMate 2.4.1 and we have fixed some bugs including the WinXP problem. Now, you can download SAMMate for WinXP from
http://sammate.sourceforge.net/download.html

We are planning to probably release Linux version in SAMMate 2.5.

If you have any problem, please let me know.
Thanks for using SAMMate!

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09-11-2010, 06:04 AM	#1
xuguorong Member Location: US Join Date: Feb 2010 Posts: 27	SAMMate 2.4 release Recently, we released SAMMate 2.4 on Sourceforge.net. We added some new features and made many enhancements. You can download it from the below link: http://sammate.sourceforge.net New features: . Support BAM format; . SAM/BAM format conversion; . SAM/BAM file sorting; . Users can now configure Output file names; Enhancements: . Changed a confusing icon; . Changed the current path display; . Changed the suffix of output file names; . Added a help contents button on the menu; . Added a progress bar; . Added a file selection dialogue; . Updated the manual;

10-26-2010, 12:33 PM	#7
EarlyAdapter Junior Member Location: Texas Join Date: Apr 2010 Posts: 2	DLLs Hello Xuguorong, This programs looks very useful and we would love to have Linux version but in the meantime, could you point us to a location for the missing DLLs and where to install them while you work on a fix? -Jack

11-19-2010, 10:49 AM	#8
xuguorong Member Location: US Join Date: Feb 2010 Posts: 27	Hi Jack, I am sorry for late response! We have released SAMMate 2.4.1 and we have fixed some bugs including the WinXP problem. Now, you can download SAMMate for WinXP from http://sammate.sourceforge.net/download.html We are planning to probably release Linux version in SAMMate 2.5. If you have any problem, please let me know. Thanks for using SAMMate! Last edited by xuguorong; 11-19-2010 at 11:17 AM.

09-13-2010, 07:45 PM	#2
atritt Junior Member Location: Davis, CA Join Date: Jul 2010 Posts: 1	This looks great. However, your software is only available for Mac and Windows users. Can you make the source available to us Linux users?

09-14-2010, 09:14 AM	#3
xuguorong Member Location: US Join Date: Feb 2010 Posts: 27	Thank you for using SAMMate! We are planning to make the software available to Linux users, but the release date has not been decided yet. Once the Linux version is ready, I will let you know.

09-17-2010, 01:59 AM	#4
Balat Member Location: Australia Join Date: May 2010 Posts: 36	Hi xuguorong, I installed SMMAte 2.4 on Windows xp machine when I tried to launch the program I get a message saying SAMMAte encountered a problem and needs to close. There may be a bug. Could please you look into it.

09-17-2010, 03:13 AM	#5
Bioinfo Member Location: canada Join Date: Jul 2010 Posts: 15	Hi Balat, I do have the same problem "SAMMate.exe has encountered a problem and needs to close. We are sorry for the inconvenience." did you fix it??? Thanks

09-17-2010, 09:52 AM	#6
xuguorong Member Location: US Join Date: Feb 2010 Posts: 27	Hi Balat and Bioinfo, I am sorry for this bug on Win XP machine! We met this kind of problem on Win XP machine before and it was caused by some .dll files missing on Win XP OS. But these .dll files are included in Win vista and 7 by default, so SAMMate does not have such problem on Win Vista and 7. I will try to fix this problem soon and let you know. Thank you for using SAMMate!