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Old 09-22-2011, 10:26 AM   #1
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Join Date: Aug 2010
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Question Annotate

I'm trying to fins a pipleine/worflow for reannotating sequences to a genome (assume human but could be any).

I need to take a list of sequences and find out the annotation for them.

Something like...

Step 1: Take input file and blast
Step 2: Take blast output and create 3 buckets
a. unique hits
b. multiple hits
c. no hits
Step 3: Annotate (but data from where)?
a. annotate unique hits by position?
b. same, but will have multiple
c. cannot find

Could someone help please?
memyselfandi is offline   Reply With Quote

annotate gene blast

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