SEQanswers

Go Back   SEQanswers > Applications Forums > RNA Sequencing



Similar Threads
Thread Thread Starter Forum Replies Last Post
Tophat: report *only* novel splice junctions? sdarko RNA Sequencing 14 04-10-2013 03:51 PM
TopHat Misses Splice Junctions CompBio Bioinformatics 8 04-10-2013 03:48 PM
Finding splice sites: TopHat and SOAPsplice export empty junction files jgw RNA Sequencing 0 01-31-2012 11:04 AM
GSNAP Output splice junctions ChrisAU RNA Sequencing 0 01-23-2012 03:59 AM
TopHat:Splice Junctions jrober04 Bioinformatics 2 05-15-2009 04:42 PM

Reply
 
Thread Tools
Old 02-22-2011, 09:38 AM   #1
twaddlac
Member
 
Location: Pittsburgh, PA

Join Date: Feb 2011
Posts: 49
Question Export Annotated Splice Junctions from NCBI?

Hello All,

I am interested in obtaining the annotated exons from genomic sequences of B. malayi, coordinates would also work. I have only seen a tedious clicking method that, in the end, only displays the coordinates for one specific gene and doesn't allow to export the data. Is there a way to download all of this (either by scripting or through the NCBI site)? Thank you in advance!
twaddlac is offline   Reply With Quote
Reply

Tags
blast, ncbi

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 12:40 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO