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Old 09-10-2009, 10:36 AM   #1
kmlong
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Default Reading Summary information

What are considered "good" ranges for intensity and % alignment?
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Old 09-10-2009, 11:37 AM   #2
kmlong
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Default GERALD summary information

I am referring to the GERALD summary information and what are considered to be "good" ranges. Is there any documentation on this? I am not running the sample, just receiving the fastq files.
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Old 09-11-2009, 08:01 AM   #3
kmlong
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Default Thanks

Thanks for all your help.
Some friends at WashU answered my questions.
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Old 04-11-2014, 01:52 PM   #4
DonRule
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I am working with at lab that will be doing pharmacogenetic assays using MiSeq. Getting the genotypes will be straightforward but copy number detection for CYP2D6 is a challenge on any platform because of confusion with CYP2D7. Does anyone know if there is a recommended way of estimating copy numbers with MiSeq?

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Don Rule
Translational Software
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