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Old 09-14-2012, 06:06 AM   #1
james hadfield
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Default Who is using Genologics LIMs

Hi all,

I'd like to find an NGS genologics customer to talk to. Is anyone using Geneus or their new Clarity LIMs? If you are based in Europe so much the better for a phone call!

Feel free to get in touch directly on +44(0)1223 404250
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Old 09-14-2012, 07:51 AM   #2
genbio64
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James,
I sent you an email but we are using that LIMS.
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Old 05-31-2013, 02:32 PM   #3
Jobjohn
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James.

Any thoughts on Clarity LIMS, serious looking at it for NHS diagnostic lab.

We got HiSeq, MiSeq, SOLiD 5500XL, 3730's, 3130's, HT7900, Cobas, Sequenom, Array stuff and a bunch of robots.

Thanks, JD.
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Old 10-10-2013, 07:53 AM   #4
james hadfield
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We have now been using Clarity for six months or so, three-four months for everything NGS in the lab and I'd say its been a success. Now we have everyone in the lab used to using it and users submitting correctly the teething problems are pretty much over.

I'd recommend it for others in my position (especially once we get reporting working well) as it should make life much easier in the long term.

However as a research lab (and with only ilumina seqeuncners integrated) it is difficult to know what else you'd need for a diagnostic lab. Genologics have a CLIA whitepaper on their website which makes for interesting reading. Do let me know what you do? I'd like to get certified for clinical sequncing at some point and might need to ask you questions instead!
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Old 10-16-2013, 01:59 PM   #5
cabrennan
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James,

I saw some of your videos on UTube, Clairity looks pretty nice, but I didn't see anything about the analysis end of the process. Does it allow you to track your analysis too? Versions of software, date run, arguments used, that sort of thing?

Thanks,

Christine
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Old 10-21-2013, 01:40 AM   #6
james hadfield
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Hmm, I'm not sure as I deal very much with the wetlab side. I know we use Clarity as part of our automated analaysis but I believe we get the data out and use an in-house built workflow manager to push the sequencing through the primary pipeline.

After primary analysis (QC, alignment, etc) we hand data over to people for the biological analysis and where they are using pipelines this information is tracked. I'd be pretty confident that in our Bioinformatics core everything is tracked.
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Old 07-13-2015, 10:48 AM   #7
sdarko
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Hi James,

We are looking at ClarityLIMS for a small sequencing core. I'm interested to know how you liking using it an additional ~2 years after your initial post.

Thanks,
Sam
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Old 08-04-2015, 01:00 PM   #8
kmcarr
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Major news regarding GenoLogics
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