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  • #1

    illuminaclip

    i am completely newbie to NGS data analysis. i just took an adapter fie and some reads to practice and play around options regarding illuminaclip and trimmomatic. i want to take out for example all reads having the first five nucleotides of adapter how u would change the options?

    my second question is that if reads are produced from a deepsequencing to find miRNAs what happens to the adapters? we should keep them?if yes what kindof tool or command you will use?
    Tags: illuminaclip, mirna, mirna identification, trimmomatic
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