Hi
I am trying to install HTSeq on MacOS El Capitan (10.11.6) like this:
pip install htseq --user
Then I got the following error message:
htslib/cram/cram_io.c:60:10: fatal error: 'lzma.h' file not found
#include <lzma.h>
^
1 error generated.
error: command 'clang' failed with exit status 1
----------------------------------------
Failed building wheel for pysam
When I type:
sudo find /usr -name lzma.h -print
I got these:
/usr/local/Cellar/xz/5.0.6/include/lzma/lzma.h
/usr/local/Cellar/xz/5.0.6/include/lzma.h
/usr/local/Cellar/xz/5.2.3/include/lzma.h
/usr/local/include/lzma.h
Does anybody here know the solution please??
Thanx.
Hiroki
I am trying to install HTSeq on MacOS El Capitan (10.11.6) like this:
pip install htseq --user
Then I got the following error message:
htslib/cram/cram_io.c:60:10: fatal error: 'lzma.h' file not found
#include <lzma.h>
^
1 error generated.
error: command 'clang' failed with exit status 1
----------------------------------------
Failed building wheel for pysam
When I type:
sudo find /usr -name lzma.h -print
I got these:
/usr/local/Cellar/xz/5.0.6/include/lzma/lzma.h
/usr/local/Cellar/xz/5.0.6/include/lzma.h
/usr/local/Cellar/xz/5.2.3/include/lzma.h
/usr/local/include/lzma.h
Does anybody here know the solution please??
Thanx.
Hiroki