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Old 04-17-2011, 08:28 PM   #1
rururara
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Location: montreal

Join Date: Jan 2011
Posts: 31
Default est contigs as reference genome

Hai all,

Can est contigs becoma as a reference genome in mapping RNA seq?
For example, papaya draft is still in progress. Can I use that as a reference genome?
Or i should start with the de novo assembly?

Thanks!
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