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Old 08-02-2013, 02:38 PM   #1
NGS_New_User
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Default Velvet assembly stats

Hi everyone,

My question is about the analysis of velvet denovo assembly.
Are the statistics printed out on the Log file the final real statistics of the assembly?
How does one go about to analyze the assembly from velvet to see if if it is of good quality.
I will appreciate whatever ideas you give, even if its re-directing me to a paper that talks about that.
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Old 08-02-2013, 02:58 PM   #2
mastal
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Quote:
Originally Posted by NGS_New_User View Post
Hi everyone,

Are the statistics printed out on the Log file the final real statistics of the assembly?
Yes, they are.

Have a look at this paper:

http://genome.cshlp.org/content/22/3/557.abstract

Last edited by mastal; 08-02-2013 at 03:03 PM.
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