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Old 06-02-2015, 05:49 AM   #1
Location: Europe

Join Date: Mar 2014
Posts: 42
Default MG-RAST heatmaps vs tables


I loaded different metagenomes and
compared them using the heatmap at the gene function level (the highest
level of comparison). I then downloaded the
values associated with the heatmap. I went back and looked at each individual metagenome and tried to find the same genes. However, I don't find them
in the individual subsystem tables. I also noticed certain genes present in the
individual tables are not present in the heatmap. Why does
this occur? Has anyone else encountered this problem?

vanillasky is offline   Reply With Quote

metagenomes, mg-rast

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