Is anyone still using BWA or have almost all switched to Bowtie 2?
Our bioinformatics team has been evaluating both. BWA is quite slow (and resource hungry) compared to Bowtie 2 although there is a rogue contingent amongst us that are still BWA supporters.
We decided to turn to SEQanswers to see what everyone else thinks - do you use BWA or Bowtie 2?
Appreciate your input!
Irene
Sequencing.com
Our bioinformatics team has been evaluating both. BWA is quite slow (and resource hungry) compared to Bowtie 2 although there is a rogue contingent amongst us that are still BWA supporters.
We decided to turn to SEQanswers to see what everyone else thinks - do you use BWA or Bowtie 2?
Appreciate your input!
Irene
Sequencing.com
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