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from CGH arrays to genome map
Dear everybody
it's still me...with a strange question! I'm analyzing data from leukemia cell lines, presenting different translocations. I saw publicly available the CGH arrays from these cell lines and I'm very interested to build a genome map (as that of HSCS browser, etc) from these data. As biologist, I would consider interesting visualizing the chip-seq data in fashion related to the chromosomal alterations (deletions, translocations, etc.), but further more even to compare the transcriptomic data with this. Anybody knows if someone already did this? Do you think that could be possible or just too much complicated to do?
Hoping to not have done too much stupid question,
my best regards,
Fabio
it's still me...with a strange question! I'm analyzing data from leukemia cell lines, presenting different translocations. I saw publicly available the CGH arrays from these cell lines and I'm very interested to build a genome map (as that of HSCS browser, etc) from these data. As biologist, I would consider interesting visualizing the chip-seq data in fashion related to the chromosomal alterations (deletions, translocations, etc.), but further more even to compare the transcriptomic data with this. Anybody knows if someone already did this? Do you think that could be possible or just too much complicated to do?
Hoping to not have done too much stupid question,
my best regards,
Fabio
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