Hi all!
I have a multi-fasta file which was masked to remove vector contamination. This has yielded some sequences to have "X" in them (probably the one which were partially masked). I wish to remove all such sequences. Can someone help me out with a perl script for the same. I guess a perl script which was originally written to remove the sequences with " N" (a much common issue) in them, would work perfectly fine.
Thanks a ton in advance
I have a multi-fasta file which was masked to remove vector contamination. This has yielded some sequences to have "X" in them (probably the one which were partially masked). I wish to remove all such sequences. Can someone help me out with a perl script for the same. I guess a perl script which was originally written to remove the sequences with " N" (a much common issue) in them, would work perfectly fine.
Thanks a ton in advance
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