So when a transcription factor binds to a DNA site, how many hydrogen bonds are formed? (In general... like 1 or 2, or 10 or more?)
And assuming the transcription factor has an associated motif, does it bond directly to the motif, or just in the nearby vicinity of the motif (say within 50bp)?
And assuming the transcription factor has an associated motif, does it bond directly to the motif, or just in the nearby vicinity of the motif (say within 50bp)?