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  • where can I find a good EST anotation pipeline?

    Hi, i'm trying to find a software preferently a local installation to make an EST annotation, but I can't find a dependable software. Where can I find something like this? It's for a transcriptome.

    Many thanks

  • #2
    Originally posted by rexxi View Post
    Hi, i'm trying to find a software preferently a local installation to make an EST annotation, but I can't find a dependable software. Where can I find something like this? It's for a transcriptome.

    Many thanks
    Your EST data is for a transcriptome? Are you sure?

    There is a program called est2assembly that I have used in the past and found to be very good [paper].

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    • #3
      BLAST2GO http://www.blast2go.com/b2ghome

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