Hi,
I was wondering if anyone has tried the ChIA-PET Tools pipeline. We are trying to install it now and are having difficulties due to various problems.
As the manual is not of so much use, we would like to ask people here for their opinion.
Was anybody able to run it?
To make my problem somewhat clearer, I would like to know what are the head and tail sequences and how do I get them from the normal fastq file?
Do I need to split the file on my own or does the tool do it for me?
I would appreciate any help or suggestions.
Thanks
Assa
I was wondering if anyone has tried the ChIA-PET Tools pipeline. We are trying to install it now and are having difficulties due to various problems.
As the manual is not of so much use, we would like to ask people here for their opinion.
Was anybody able to run it?
To make my problem somewhat clearer, I would like to know what are the head and tail sequences and how do I get them from the normal fastq file?
Do I need to split the file on my own or does the tool do it for me?
I would appreciate any help or suggestions.
Thanks
Assa
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