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Old 06-15-2009, 08:53 AM   #1
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Location: Houston, TX

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Default Small RNA Pipeline

I am running a small RNA project for the first time, and I am curious if anyone knows where I can get a multi-FASTA file containing the sequences to be removed during the filtering step (rRNA, tRNA, adaptor sequences). My project involves human samples.
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Old 06-15-2009, 09:57 PM   #2
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You will get them from NCBI databases, and adapter sequences ..get them from vendor...(may from some documentation)...
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Old 06-18-2009, 09:51 AM   #3
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The dataset for the smallRNA pipeline includes this file (human_filter_reference.fasta)

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