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  • Cufflinks - twofold increase in expression

    How does one judge using the (RPKM values) what is a twofold change in expression?

    For example, for a given gene, a value of 1.0 is background. Would a value of 3.0 be equivalent to a two fold increase of expression?

    Thanks,

  • #2
    Rpkm values are interpreted as they are. A value of 10 is 2x a value of 5 and is therefore two-fold increased. I'm not sure what you're asking here.
    /* Shawn Driscoll, Gene Expression Laboratory, Pfaff
    Salk Institute for Biological Studies, La Jolla, CA, USA */

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    • #3
      Originally posted by sdriscoll View Post
      Rpkm values are interpreted as they are. A value of 10 is 2x a value of 5 and is therefore two-fold increased. I'm not sure what you're asking here.
      That's excatly what I'm asking; thank you!

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