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12-26-2010, 11:19 PM
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#1 |
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Junior Member
Location: whole transcriptome Join Date: Oct 2010
Posts: 8
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Optimal k-mer and N50?
Hi
I am a new hand for De novo discovery, I find Velvet and ABySS require K-mers, I have single-end SOLiD data and think to know how to get optimal k-mer and N50. Can everyone give me some paper for K-mer or N50? Thanks for any comments in advance. I am looking forward to your letter |
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12-28-2010, 10:03 AM
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#2 |
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(Jeremy Leipzig)
Location: Philadelphia, PA Join Date: May 2009
Posts: 116
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http://www.google.com/search?q=Optimal+k-mer+and+N50
there are a ton of links here. please do some research and come back with a precise question. |
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