Hi everyone,
I'm trying to do some alignments, but my latest illumina data came with a rather strange suffix. The read identifiers looks like, so for the pairs:
@HWI-ST201:195:BB0036ABXX:6:1101:1407:1941 1:N:0:
@HWI-ST201:195:BB0036ABXX:6:1101:1407:1941 2:N:0:
This seems to be confusing a number of programs, does anyone know of good script to trim off that 1:N:0: and just add a more standard .1 or .F kind of thing?
Thanks
I'm trying to do some alignments, but my latest illumina data came with a rather strange suffix. The read identifiers looks like, so for the pairs:
@HWI-ST201:195:BB0036ABXX:6:1101:1407:1941 1:N:0:
@HWI-ST201:195:BB0036ABXX:6:1101:1407:1941 2:N:0:
This seems to be confusing a number of programs, does anyone know of good script to trim off that 1:N:0: and just add a more standard .1 or .F kind of thing?
Thanks
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