Hi
I recently received GA2 human paired end data. One thing that bothers me is that the length of both the reads combined is odd, 105bp, and not 72bp (2x36) or 100bp (2x50) or 120bp.
I asked the data provider about it, and she said that the cycles used during the run were 50 and 55.
Being a computer scientist by default, is it possible to have the "forward" and "reverse" read of different lengths? Presumable I can just split of the first 50bp to generate PE data for input into Mosaik/Velvet.
All help would be appreciated
Carl
I recently received GA2 human paired end data. One thing that bothers me is that the length of both the reads combined is odd, 105bp, and not 72bp (2x36) or 100bp (2x50) or 120bp.
I asked the data provider about it, and she said that the cycles used during the run were 50 and 55.
Being a computer scientist by default, is it possible to have the "forward" and "reverse" read of different lengths? Presumable I can just split of the first 50bp to generate PE data for input into Mosaik/Velvet.
All help would be appreciated
Carl
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