Hi,
I have time-series RNA-Seq data . Both FPKM and counts values are available. Especially for the DE analysis, Counts are transformed to voomed values and all the DE-tests are performed. I would like to find out the group of genes that are having similar trend over time.
Eg, I would like to pick the genes that are showing similar trend like GeneA
Gene A :
T0 T1 T2 T3 T4 T5
10 20 30 25 10 2
Is there any proper approach to categorize the genes .
Any method or papers or suggestions will of great help.
I have time-series RNA-Seq data . Both FPKM and counts values are available. Especially for the DE analysis, Counts are transformed to voomed values and all the DE-tests are performed. I would like to find out the group of genes that are having similar trend over time.
Eg, I would like to pick the genes that are showing similar trend like GeneA
Gene A :
T0 T1 T2 T3 T4 T5
10 20 30 25 10 2
Is there any proper approach to categorize the genes .
Any method or papers or suggestions will of great help.
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