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Old 04-24-2014, 02:00 PM   #1
Location: San Francisco, CA

Join Date: Aug 2011
Posts: 91
Default Is there any "gold standard" VCFs for well-known cell lines?

Does anyone know if there is any "gold standard" of variant files (i.e., vcf files for somatic mutations) for well-known and well-studied cell lines like HCC1143, HCC1954?

There are things like this:

But there has to be better ones out there.

lethalfang is offline   Reply With Quote
Old 04-25-2014, 02:57 PM   #2
Location: SF Bay Area

Join Date: Feb 2012
Posts: 62

Take a look at
Definitely looking towards producing what you're asking for, and available in the case of NA12878:
jparsons is offline   Reply With Quote

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