I am analyzing protein uncharacterized bacteria so far, which have a transmembrane domain and a coiled coil domio with low identity that other characterized protein of another bacteria phylum. In prediction programs, I observed that this protein has a Coiled coil domain in C' terminus, right in the periplasm, contrary to this, the protein that is apparently homologous has the coiled-coil in the N' terminus also targeted to the periplasm.
I can not find examples of homologous proteins which have opposite directions.
I can not find examples of homologous proteins which have opposite directions.
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