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Old 05-10-2011, 11:38 PM   #1
Location: Germany

Join Date: Dec 2010
Posts: 80
Default Consensus algorithm recommendations for NGS amplicon sequencing

I am looking for an algorithm to generate consensus sequences with consensus phred like quality values from NGS amplicon sequencing data.

Illumina paired end reads with 150 bp. Platform independent solutions would be even better.

Thanks for suggestions to this maybe trivial question!
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consensus quality

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