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Old 02-12-2012, 12:37 AM   #1
jfb
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Location: SF bay area

Join Date: Nov 2011
Posts: 7
Default under the hood of Unified genotyper

Does anyone know of a good reference/webpage that describes what is actually going on inside of GATK's Unified Genotyper? The only detail that I could find was a link from their 'unified genotyper' page to a dense mathematical paper by Heng Li (http://www.broadinstitute.org/gsa/wi...0/Samtools.pdf). I was looking for something in between this document by Li and their user manual. Thanks.
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